Cactus is a reference-free whole-genome multiple alignment program. The principal algorithms are described here: https://doi.org/10.1101/gr.123356.111
| Version | module name |
|---|---|
| 1.2.3 | cactus/1.2.3 |
| 1.3.0 | cactus/1.3.0 |
Command line option to run cactus
--binariesMode singularity --maxCores ${SLURM_NTASKS}
Example: /share/Apps/examples/cactus
More Information: https://github.com/ComparativeGenomicsToolkit/cactus