Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography.
| Version | module name |
|---|---|
| 2.5.5 | stacks/2.55 |
For more information, visit https://catchenlab.life.illinois.edu/stacks/