Salmon is a tool for quantifying the expression of transcripts using RNA-seq data. Salmon uses new algorithms (specifically, coupling the concept of quasi-mapping with a two-phase inference procedure) to provide accurate expression estimates very quickly (i.e. wicked-fast) and while using little memory. Salmon performs its inference using an expressive and realistic model of RNA-seq data that takes into account experimental attributes and biases commonly observed in real RNA-seq data.
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module load salmon |
Usage
| Version | module name |
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| 0.14.1 | salmon/0.14.1 |
Links
For more information visit visit http://combine-lab.github.io/salmon/
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