What is Python?
Python is an interpreted, high-level and general-purpose programming language. Python's design philosophy emphasizes code readability with its notable use of significant indentation.
What is Anaconda?
Anaconda is a freemium open source distribution of the Python and R programming languages for large-scale data processing, predictive analytics, and scientific computing, that aims to simplify package management and deployment. Its package management system is conda.
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| title | List of Python packages (Updated on 12/10/21) |
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The python/3.8.6 module is loaded by default. To use packages listed under that module, run the command module load all. To use MPI enabled packages, mpi4py, horovod, pytorch and tensorflow, you need to unload the intel module if loaded and load one of the mpi modules - mpich, mvapich2 or openmpi. For others, first load the anaconda3/2020.07 module using module load anaconda3/2020.07 followed by any one of the conda modules for e.g. module load conda/chem. You can load both at the same time for eg. module load python/3.8.6 all OR module load anaconda3/2020.07 conda/bioinformatics. If you get an error, load them sequentially. The conda/spark module was built for use with Apache Spark and provides R packages such as sparklyr Package | anaconda3/2020.07 | python/3.8.6+all | conda/biofluids | conda/bioinformatics | conda/biostats | conda/chem | conda/mldl | conda/nlp | conda/spark | conda/dlc |
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absl-py |
| 0.10.0 |
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| 0.13.0 |
| 0.10.0 |
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| 0.15.0 | aiohttp |
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| 3.7.4.post0 |
| 3.7.3 |
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| 3.8.1 | aiosignal |
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| 1.2.0 | alabaster | 0.7.12 |
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| 0.7.12 |
| amset |
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| 0.3.0 |
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| anaconda-client | 1.7.2 |
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| anaconda-navigator | 1.9.12 |
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| anaconda-project | 0.8.3 |
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| anyio |
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| 3.1.0 | 3.1.0 | 3.3.0 | 3.1.0 | 3.1.0 | 3.1.0 | 3.4.0 | 3.5.0 | APScheduler |
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| 3.6.3 |
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| argh | 0.26.2 |
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| 0.26.2 |
| argon2-cffi |
| 20.1.0 | 20.1.0 | 20.1.0 | 20.1.0 | 20.1.0 | 20.1.0 | 20.1.0 | 21.1.0 | 21.3.0 | argon2-cffi-bindings |
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| 21.2.0 | arrow |
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| 1.2.1 |
| arviz |
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| 0.11.2 |
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| asciinema |
| 2.0.2 |
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| ase |
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| 3.20.1 |
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| asn1crypto | 1.3.0 |
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| astor |
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| 0.8.1 |
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| astroid | 2.4.2 |
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| 2.9.0 |
| astropy | 4.0.1.post1 |
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| asttokens |
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| 2.0.5 | astunparse |
| 1.6.3 |
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| 1.6.3 | 1.6.3 |
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| 1.6.3 | async-generator |
| 1.10 | 1.10 | 1.10 | 1.10 | 1.10 | 1.10 | 1.10 | 1.10 |
| async-timeout |
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| 3.0.1 |
| 3.0.1 |
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| 4.0.2 | atomicwrites | 1.4.0 |
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| 1.4.0 |
| attrs | 19.3.0 | 20.3.0 | 20.3.0 | 20.3.0 | 21.2.0 | 20.3.0 | 20.3.0 | 20.3.0 | 21.2.0 | 21.4.0 | autopep8 | 1.5.3 |
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| 1.6.0 |
| Babel | 2.8.0 | 2.7.0 | 2.9.1 | 2.9.1 | 2.9.1 | 2.9.1 | 2.9.1 | 2.9.1 | 2.9.1 | 2.9.1 | backcall | 0.2.0 | 0.1.0 | 0.2.0 | 0.2.0 | 0.2.0 | 0.2.0 | 0.2.0 | 0.2.0 | 0.2.0 | 0.2.0 | backports.functools-lru-cache | 1.6.4 |
| 1.6.1 | 1.6.1 | 1.6.4 | 1.6.1 | 1.6.1 | 1.6.1 | 1.6.4 | 1.6.4 | backports.shutil-get-terminal-size | 1.0.0 |
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| backports.tempfile | 1.0 |
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| backports.weakref | 1.0.post1 |
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| barcode-splitter |
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| 0.18.6 |
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| beautifulsoup4 | 4.9.1 |
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| 4.9.3 |
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| 4.10.0 | binaryornot |
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| 0.4.4 |
| biopython |
| 1.73 |
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| 1.78 |
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| bitarray | 1.4.0 |
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| bkcharts | 0.2 |
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| black |
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| 21.11b1 |
| bleach | 3.1.5 | 3.1.0 | 3.2.1 | 3.2.1 | 4.0.0 | 3.2.1 | 3.2.1 | 3.2.1 | 4.1.0 | 4.1.0 | blinker |
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| 1.4 |
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| 1.4 | bokeh | 2.1.1 |
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| boltons |
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| 21.0.0 |
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| BoltzTraP2 |
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| 20.7.1 |
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| boto | 2.49.0 |
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| Bottleneck | 1.3.2 | 1.2.1 |
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| brotlipy | 0.7.0 |
| 0.7.0 | 0.7.0 | 0.7.0 | 0.7.0 | 0.7.0 | 0.7.0 | 0.7.0 | 0.7.0 | cached-property |
| 1.5.2 |
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| 1.5.1 |
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| 1.5.2 | cachetools |
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| 4.2.2 |
| 4.1.1 |
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| 5.0.0 | cclib |
| 1.5.post1 |
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| 1.6.4 |
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| certifi | 2020.6.20 | 2020.6.20 | 2021.5.30 | 2021.5.30 | 2021.5.30 | 2021.5.30 | 2021.10.8 | 2021.5.30 | 2021.10.8 | 2021.10.8 | cffi | 1.14.0 | 1.14.3 | 1.14.3 | 1.14.3 | 1.14.6 | 1.14.3 | 1.14.3 | 1.14.3 | 1.15.0 | 1.14.6 | cftime |
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| 1.5.0 | 1.3.0 |
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| chardet | 3.0.4 | 3.0.4 | 3.0.4 | 3.0.4 | 4.0.0 | 3.0.4 | 3.0.4 | 3.0.4 | 4.0.0 |
| charset-normalizer |
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| 2.0.0 |
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| 2.0.9 | 2.0.12 | click | 7.1.2 | 7.1.2 |
| 7.1.2 | 8.0.1 | 7.1.2 | 7.1.2 |
| 8.0.3 | 8.0.4 | click-plugins |
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| 1.1.1 |
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| cligj |
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| 0.7.2 |
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| cloudpickle | 1.5.0 | 1.2.1 |
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| 1.6.0 | 1.6.0 |
| 2.0.0 |
| clyent | 1.2.2 |
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| colorama | 0.4.3 | 0.4.4 | 0.4.4 | 0.4.4 | 0.4.4 | 0.4.4 | 0.4.4 | 0.4.4 | 0.4.4 | 0.4.4 | coloredlogs |
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| 15.0 |
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| colormath |
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| 3.0.0 |
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| commonmark |
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| 0.9.1 |
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| conda | 4.10.3 |
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| conda-build | 3.18.11 |
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| conda-package-handling | 1.7.3 |
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| conda-verify | 3.4.2 |
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| configobj |
| 5.0.6 |
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| contextlib2 | 0.6.0.post1 |
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| cookiecutter |
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| 1.6.0 |
| covidcast |
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| 0.1.5 |
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| cryptography | 2.9.2 | 3.3.2 | 3.2.1 | 3.2.1 | 3.4.7 | 3.2.1 | 3.2.1 | 3.2.1 | 36.0.0 | 36.0.1 | cycler | 0.10.0 | 0.10.0 | 0.10.0 | 0.10.0 | 0.10.0 | 0.10.0 | 0.10.0 | 0.10.0 | 0.11.0 | 0.11.0 | Cython | 0.29.21 | 0.29.21 |
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| 0.29.17 | 0.29.21 |
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| cytoolz | 0.10.1 |
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| 0.11.0 |
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| dask | 2.20.0 | 2.16.0 |
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| 2021.6.2 | 2.30.0 |
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| dataclasses |
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| 0.8 |
| debugpy |
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| 1.4.1 |
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| 1.5.1 | 1.5.1 | decorator | 4.4.2 | 4.4.2 | 4.4.2 | 4.4.2 | 5.0.9 | 4.4.2 | 4.4.2 | 4.4.2 | 5.1.0 | 4.4.2 | deeplabcut |
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| 2.2.0.6 | defusedxml | 0.6.0 | 0.6.0 | 0.6.0 | 0.6.0 | 0.7.1 | 0.6.0 | 0.6.0 | 0.6.0 | 0.7.1 | 0.7.1 | delphi-epidata |
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| 0.2.6 |
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| descartes |
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| 1.1.0 |
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| diff-match-patch | 20200713 |
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| 20200713 |
| dill |
| 0.3.1.dev0 |
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| 0.3.4 | 0.3.4 |
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| diskcache |
| 4.1.0 |
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| distributed | 2.20.0 | 2.10.0 |
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| docutils | 0.16 |
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| 0.16 |
| eliot |
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| 1.13.0 |
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| entrypoints | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.4 | epiweeks |
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| 2.1.2 |
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| et-xmlfile | 1.0.1 |
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| executing |
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| 0.8.3 | fastcache | 1.1.0 |
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| fastprogress |
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| 1.0.0 |
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| filelock | 3.0.12 |
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| 3.0.12 |
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| filterpy |
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| 1.4.5 | findspark |
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| 1.4.2 |
| Fiona |
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| 1.8.20 |
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| flake8 | 3.8.3 |
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| 4.0.1 |
| Flask | 1.1.2 |
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| 1.1.2 |
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| flatbuffers |
| 20210514195623 |
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| 2.0 |
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| 1.12 | flit_core |
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| 3.7.1 | fonttools |
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| 4.28.3 | 4.31.1 | frozenlist |
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| 1.3.0 | fsspec | 0.7.4 | 0.7.3 |
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| 2021.6.0 |
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| future | 0.18.2 | 0.18.2 |
| 0.18.2 |
| 0.18.2 |
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| 0.18.2 |
| gast |
| 0.3.3 |
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| 0.3.3 |
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| 0.4.0 | geomm |
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| 0.2.0 |
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| geopandas |
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| 0.9.0 |
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| gevent | 20.6.2 |
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| gitdb | 4.0.7 | 4.0.7 | 4.0.7 | 4.0.7 | 4.0.7 | 4.0.7 | 4.0.7 | 4.0.7 | 4.0.9 | 4.0.9 | GitPython | 3.1.18 | 3.1.18 | 3.1.17 | 3.1.17 | 3.1.18 | 3.1.17 | 3.1.17 | 3.1.17 | 3.1.24 | 3.1.27 | glob2 | 0.7 |
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| globus-cli |
| 2.1.0 |
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| globus-sdk |
| 2.0.1 |
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| gmpy2 | 2.0.8 |
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| 2.1.0b1 |
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| google-auth |
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| 1.23.0 |
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| 2.6.2 | google-auth-oauthlib |
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| 0.4.1 |
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| 0.4.6 | google-pasta |
| 0.2.0 |
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| 0.2.0 |
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| 0.2.0 | greenlet | 0.4.16 |
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| GridDataFormats |
| 0.5.0 |
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| 0.5.0 |
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| grpcio |
| 1.32.0 |
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| 1.33.2 |
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| 1.39.0 | gsd |
| 1.9.3 |
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| 2.4.0 |
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| h5py | 2.10.0 | 2.10.0 |
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| 2.10.0 | 2.10.0 |
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| 3.1.0 | HeapDict | 1.0.1 | 1.0.1 |
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| horovod |
| 0.21.3 |
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| html5lib | 1.1 |
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| HTSeq |
| 0.11.2 |
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| humanfriendly |
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| 9.1 |
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| idna | 2.10 | 2.8 | 2.10 | 2.10 | 3.1 | 2.10 | 2.10 | 2.10 | 3.1 | 3.3 | imagecodecs |
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| 2020.5.30 |
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| imageio | 2.9.0 | 2.5.0 |
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| 2.9.0 |
| 2.9.0 |
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| 2.15.0 | imageio-ffmpeg |
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| 0.4.4 |
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| 0.4.5 | imagesize | 1.2.0 |
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| 1.3.0 |
| imgaug |
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| 0.4.0 | importlib-metadata | 1.7.0 |
| 3.0.0 | 3.0.0 | 4.6.3 | 3.0.0 | 3.0.0 | 3.0.0 | 4.8.2 | 4.11.3 | importlib-resources |
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| 5.4.0 | 5.4.0 | inflection |
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| 0.5.1 |
| interpolation |
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| 2.1.6 |
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| intervaltree | 3.0.2 |
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| 3.0.2 |
| ipykernel | 5.3.2 | 5.3.4 | 5.3.4 | 5.3.4 | 6.0.3 | 5.3.4 | 5.3.4 | 5.3.4 | 6.6.0 | 6.9.2 | ipython | 7.16.1 | 7.18.1 | 7.19.0 | 7.19.0 | 7.26.0 | 7.19.0 | 7.19.0 | 7.19.0 | 7.30.1 | 8.1.1 | ipython-genutils | 0.2.0 | 0.2.0 | 0.2.0 | 0.2.0 | 0.2.0 | 0.2.0 | 0.2.0 | 0.2.0 | 0.2.0 | 0.2.0 | ipywidgets | 7.5.1 | 7.5.1 | 7.5.1 | 7.5.1 | 7.6.3 | 7.5.1 | 7.5.1 | 7.5.1 | 7.6.5 | 7.7.0 | isort | 4.3.21 |
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| 5.10.1 |
| itsdangerous | 1.1.0 |
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| 1.1.0 |
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| jax |
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| 0.2.17 |
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| jaxlib |
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| 0.1.67 |
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| jdcal | 1.4.1 |
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| jedi | 0.17.1 | 0.13.3 | 0.17.2 | 0.17.2 | 0.18.0 | 0.17.2 | 0.17.2 | 0.17.2 | 0.18.1 | 0.18.1 | jeepney | 0.4.3 |
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| 0.7.1 |
| jellyfish |
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| 0.8.9 |
| Jinja2 | 2.11.2 | 2.10.3 | 2.11.2 | 2.11.2 | 3.0.1 | 2.11.2 | 2.11.2 | 2.11.2 | 3.0.3 | 3.0.3 | jinja2-time |
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| 0.2.0 |
| jmespath |
| 0.10.0 |
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| joblib | 0.16.0 | 0.14.0 |
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| 1.0.1 | 0.17.0 | 0.17.0 |
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| 1.1.0 | json5 | 0.9.5 | 0.9.4 | 0.9.5 | 0.9.5 | 0.9.5 | 0.9.5 | 0.9.5 | 0.9.5 | 0.9.5 | 0.9.5 | jsonschema | 3.2.0 | 3.2.0 | 3.2.0 | 3.2.0 | 3.2.0 | 3.2.0 | 3.2.0 | 3.2.0 | 4.2.1 | 4.4.0 | jupyter | 1.0.0 | 1.0.0 |
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| 1.0.0 |
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| 1.0.0 | 1.0.0 | jupyter-client | 6.1.6 | 6.1.7 | 6.1.7 | 6.1.7 | 6.1.12 | 6.1.7 | 6.1.7 | 6.1.7 | 7.1.0 | 7.1.2 | jupyter-console | 6.1.0 | 6.1.0 | 6.2.0 | 6.2.0 | 6.4.0 | 6.2.0 | 6.2.0 | 6.2.0 | 6.4.0 | 6.4.3 | jupyter-core | 4.6.3 | 4.6.3 | 4.7.0 | 4.7.0 | 4.7.1 | 4.7.0 | 4.7.0 | 4.7.0 | 4.9.1 | 4.9.2 | jupyter-server |
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| 1.8.0 | 1.8.0 | 1.10.2 | 1.8.0 | 1.8.0 | 1.8.0 | 1.13.1 | 1.15.6 | jupyter-server-mathjax |
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| 0.2.3 | 0.2.3 | 0.2.3 | 0.2.3 | 0.2.3 | 0.2.3 | 0.2.3 | 0.2.5 | jupyterlab | 2.1.5 | 2.2.7 | 3.0.16 | 3.0.16 | 3.1.1 | 3.0.16 | 3.0.16 | 3.0.16 | 3.2.4 | 3.3.2 | jupyterlab-git | 0.24.0 | 0.24.0 | 0.30.1 | 0.30.1 | 0.31.0 | 0.30.1 | 0.30.1 | 0.30.1 | 0.34.0 | 0.34.2 | jupyterlab-pygments |
| 0.1.1 | 0.1.2 | 0.1.2 | 0.1.2 | 0.1.2 | 0.1.2 | 0.1.2 | 0.1.2 | 0.1.2 | jupyterlab-server | 1.2.0 | 1.2.0 | 2.6.0 | 2.6.0 | 2.6.2 | 2.6.0 | 2.6.0 | 2.6.0 | 2.8.2 | 2.11.0 | jupyterlab-widgets |
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| 1.0.0 |
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| 1.0.2 | 1.1.0 | keras |
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| 2.6.0 | Keras |
| 2.2.4 |
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| 2.4.3 |
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| Keras-Applications |
| 1.0.8 |
|
|
|
|
|
|
|
| Keras-Preprocessing |
| 1.1.2 |
|
|
|
| 1.1.0 |
|
| 1.1.2 | keyring | 21.2.1 |
|
|
|
|
|
|
| 23.4.0 |
| kiwisolver | 1.2.0 | 1.1.0 | 1.3.1 | 1.3.1 | 1.3.1 | 1.3.1 | 1.3.1 | 1.3.1 | 1.3.2 | 1.4.0 | klepto |
|
|
|
| 0.2.1 |
|
|
|
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| latexcodec |
|
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|
|
| 2.0.1 |
|
|
|
| lazy-object-proxy | 1.4.3 |
|
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|
| 1.6.0 |
| libarchive-c | 2.9 |
|
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|
|
|
| llvmlite | 0.33.0+1.g022ab0f | 0.34.0 | 0.34.0 |
|
| 0.35.0 |
|
|
| 0.38.0 | locket | 0.2.0 | 0.2.0 |
|
|
| 0.2.1 |
|
|
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| loguru |
|
|
|
|
| 0.5.3 |
|
|
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| lxml | 4.5.2 | 4.5.2 |
|
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|
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| lzstring |
|
|
| 1.0.4 |
|
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| Mako |
| 1.0.4 |
|
| 1.1.4 |
| 1.1.3 |
|
|
| Markdown |
|
|
| 3.3.4 |
|
| 3.3.3 |
|
| 3.3.6 | MarkupSafe | 1.1.1 | 1.1.1 | 1.1.1 | 1.1.1 | 2.0.1 | 1.1.1 | 1.1.1 | 1.1.1 | 2.0.1 | 2.1.1 | matplotlib | 3.2.2 | 3.3.3 | 3.3.3 | 3.3.3 | 3.4.2 | 3.3.2 | 3.3.3 | 3.3.3 | 3.5.0 | 3.5.1 | matplotlib-inline |
|
|
|
| 0.1.2 |
|
|
| 0.1.3 | 0.1.3 | mccabe | 0.6.1 |
|
|
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|
|
| 0.6.1 |
| MDAnalysis |
| 1.0.0 |
|
|
| 1.0.0 |
|
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| mdtraj |
|
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|
| 1.9.6 |
|
|
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| memory-profiler |
|
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| 0.58.0 |
|
|
|
| mistune | 0.8.4 | 0.8.4 | 0.8.4 | 0.8.4 | 0.8.4 | 0.8.4 | 0.8.4 | 0.8.4 | 0.8.4 | 0.8.4 | mkl-fft | 1.1.0 |
|
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|
| mkl-random | 1.1.1 |
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| mkl-service | 2.3.0 |
|
|
| 2.4.0 |
| 2.3.0 |
|
|
| mmtf-python |
| 1.1.2 |
|
|
| 1.1.2 |
|
|
|
| mock | 4.0.2 | 3.0.5 |
|
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|
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|
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| molmod |
|
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|
|
| 1.4.8 |
|
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| moltemplate |
| 2.5.8 |
|
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| monty |
|
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|
| 4.0.2 |
|
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| more-itertools | 8.4.0 |
|
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| moviepy |
|
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|
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| 1.0.3 | mpi4py |
| 3.0.3 |
|
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|
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| mpmath | 1.1.0 |
|
|
| 1.2.1 | 1.1.0 |
|
|
|
| msgpack | 1.0.0 | 1.0.0 |
|
|
| 1.0.0 |
|
|
| 1.0.3 | msgpack-numpy |
|
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|
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|
|
| 0.4.7.1 | multidict |
|
|
|
| 5.1.0 |
| 4.7.5 |
|
| 6.0.2 | multipledispatch | 0.6.0 |
|
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|
|
| multiprocessing-logging |
|
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| 0.3.1 |
|
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| multiqc |
|
|
| 1.10 |
|
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| munch |
|
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| 2.5.0 |
|
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| munkres |
|
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| 1.1.4 | 1.1.4 | mypy-extensions |
|
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|
|
| 0.4.3 |
| mystic |
|
|
|
| 0.3.8 |
|
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|
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| navigator-updater | 0.2.1 |
|
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| nb-conda |
|
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|
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| 2.2.1 | nb-conda-kernels |
|
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|
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|
| 2.3.1 | nbclassic |
|
| 0.3.1 | 0.3.1 | 0.3.1 | 0.3.1 | 0.3.1 | 0.3.1 | 0.3.4 | 0.3.7 | nbclient |
| 0.5.0 | 0.5.1 | 0.5.1 | 0.5.3 | 0.5.1 | 0.5.1 | 0.5.1 | 0.5.9 | 0.5.13 | nbconvert | 5.6.1 | 6.0.1 | 6.0.7 | 6.0.7 | 6.1.0 | 6.0.7 | 6.0.7 | 6.0.7 | 6.3.0 | 6.4.4 | nbdime | 2.1.0 | 2.1.0 | 3.1.0 | 3.1.0 | 3.1.0 | 3.1.0 | 3.1.0 | 3.1.0 | 3.1.1 | 3.1.1 | nbformat | 5.0.7 | 5.0.7 | 5.0.8 | 5.0.8 | 5.1.3 | 5.0.8 | 5.0.8 | 5.0.8 | 5.1.3 | 5.2.0 | ndim |
|
|
|
|
| 0.1.4 |
|
|
|
| nest-asyncio |
| 1.4.0 | 1.4.3 | 1.4.3 | 1.5.1 | 1.4.3 | 1.4.3 | 1.4.3 | 1.5.4 | 1.5.4 | netCDF4 |
|
|
|
| 1.5.7 | 1.5.4 |
|
|
|
| networkx | 2.4 | 2.4 |
| 2.5 |
| 2.5.1 | 2.5 |
|
| 2.7.1 | nltk | 3.5 |
|
|
|
|
|
| 3.4.4 |
|
| nose | 1.3.7 | 1.3.7 |
|
|
|
|
|
|
|
| notebook | 6.0.3 | 6.1.4 | 6.1.5 | 6.1.5 | 6.4.0 | 6.1.5 | 6.1.5 | 6.1.5 | 6.4.6 | 6.4.10 | notebook-shim |
|
|
|
|
|
|
|
|
| 0.1.0 | numba | 0.50.1 | 0.50.1 | 0.51.2 |
|
| 0.52.0 |
|
|
| 0.55.1 | numexpr | 2.7.1 | 2.7.0 |
|
|
|
|
|
|
| 2.8.1 | numpy | 1.18.5 | 1.19.4 | 1.19.4 | 1.19.4 | 1.19.5 | 1.19.4 | 1.19.4 | 1.19.4 | 1.21.4 | 1.19.5 | numpydoc | 1.1.0 |
|
|
|
|
|
|
| 1.1.0 |
| oauthlib |
|
|
|
|
|
| 3.0.1 |
|
| 3.2.0 | olefile | 0.46 |
| 0.46 | 0.46 | 0.46 | 0.46 | 0.46 | 0.46 | 0.46 |
| opencv-python |
|
|
|
|
|
|
|
|
| 4.5.5.64 | OpenMM |
|
|
|
|
| 7.5.1 |
|
|
|
| openmm-systems |
|
|
|
|
| 0.0.0 |
|
|
|
| openpyxl | 3.0.4 |
|
|
|
|
|
|
|
|
| opt-einsum |
| 3.3.0 |
|
| 3.3.0 |
| 0+untagged.61.gd905544.dirty |
|
| 3.3.0 | orthopy |
|
|
|
|
| 0.8.4 |
|
|
|
| packaging | 20.4 | 21.0 | 20.4 | 20.4 | 21.0 | 20.4 | 20.4 | 20.4 | 21.3 | 21.3 | palettable |
|
|
|
|
| 3.3.0 |
|
|
|
| pandas | 1.0.5 | 1.1.4 | 1.1.4 | 1.1.4 | 1.3.1 | 1.1.4 | 1.1.4 | 1.1.4 | 1.3.4 | 1.4.1 | pandocfilters | 1.4.2 | 1.4.2 | 1.4.2 | 1.4.2 | 1.4.2 | 1.4.2 | 1.4.2 | 1.4.2 | 1.5.0 | 1.5.0 | parso | 0.7.0 | 0.6.1 | 0.7.1 | 0.7.1 | 0.8.2 | 0.7.1 | 0.7.1 | 0.7.1 | 0.8.3 | 0.8.3 | partd | 1.1.0 | 1.1.0 |
|
|
| 1.2.0 |
|
|
|
| path | 13.1.0 |
|
|
|
|
|
|
|
|
| pathlib2 | 2.3.5 |
|
|
|
|
|
|
|
| 2.3.7.post1 | pathspec |
|
|
|
|
|
|
|
| 0.9.0 |
| pathtools | 0.1.2 |
|
|
|
|
|
|
|
|
| patsy | 0.5.1 |
| 0.5.1 | 0.5.1 | 0.5.1 | 0.5.1 | 0.5.1 | 0.5.1 | 0.5.2 | 0.5.2 | pbr |
| 2.0.0 |
|
|
|
|
|
|
|
| pep8 | 1.7.1 |
|
|
|
|
|
|
|
|
| periodictable |
|
|
|
|
| 1.5.2 |
|
|
|
| petastorm |
| 0.9.8 |
|
|
|
|
|
|
|
| pexpect | 4.8.0 | 4.7.0 | 4.8.0 | 4.8.0 | 4.8.0 | 4.8.0 | 4.8.0 | 4.8.0 | 4.8.0 | 4.8.0 | phono3py |
|
|
|
|
| 1.21.0 |
|
|
|
| phonopy |
| 1.10.0 |
|
|
| 2.8.1 |
|
|
|
| pickleshare | 0.7.5 | 0.7.5 | 0.7.5 | 0.7.5 | 0.7.5 | 0.7.5 | 0.7.5 | 0.7.5 | 0.7.5 | 0.7.5 | Pillow | 7.2.0 | 7.2.0 | 8.0.1 | 8.0.1 | 8.3.1 | 8.0.1 | 8.0.1 | 8.0.1 | 8.4.0 | 9.0.1 | Pint |
|
|
|
|
| 0.17 |
|
|
|
| pip | 20.1.1 | 20.2 | 20.2.4 | 20.2.4 | 21.2.2 | 20.2.4 | 20.2.4 | 20.2.4 | 21.3.1 | 22.0.4 | pkginfo | 1.5.0.1 |
|
|
|
|
|
|
|
|
| platformdirs |
|
|
|
|
|
|
|
| 2.3.0 |
| plotly |
|
|
|
|
| 4.14.1 |
|
|
|
| pluggy | 0.13.1 |
|
|
|
|
|
|
| 1.0.0 |
| ply | 3.11 |
|
|
|
|
|
|
|
|
| pmdarima |
|
|
|
| 1.8.1 |
|
|
|
|
| porechop |
| 0.2.4 |
| 0.2.4 |
|
|
|
|
|
| pox |
|
|
|
| 0.3.0 |
|
|
|
|
| poyo |
|
|
|
|
|
|
|
| 0.5.0 |
| proglog |
|
|
|
|
|
|
|
|
| 0.1.9 | prometheus-client | 0.8.0 | 0.7.1 | 0.9.0 | 0.9.0 | 0.11.0 | 0.9.0 | 0.9.0 | 0.9.0 | 0.12.0 | 0.13.1 | prompt-toolkit | 3.0.5 | 2.0.9 | 3.0.8 | 3.0.8 | 3.0.19 | 3.0.8 | 3.0.8 | 3.0.8 | 3.0.24 | 3.0.27 | protobuf |
| 3.12.2 |
|
|
|
| 3.13.0 |
|
| 3.16.0 | psutil | 5.7.0 | 5.7.2 |
|
|
| 5.8.0 |
|
| 5.8.0 | 5.9.0 | ptyprocess | 0.6.0 | 0.6.0 | 0.6.0 | 0.6.0 | 0.7.0 | 0.6.0 | 0.6.0 | 0.6.0 | 0.7.0 | 0.7.0 | pure-eval |
|
|
|
|
|
|
|
|
| 0.2.2 | py | 1.9.0 | 1.8.0 |
|
|
|
|
|
|
|
| py4j |
| 0.10.9 |
|
|
|
| 0.10.9.2 |
| 0.10.9.2 |
| pyarrow |
| 0.17.1 |
|
|
|
| 2.0.0 |
| 5.0.0 |
| pyasn1 |
|
|
|
|
|
| 0.4.8 |
|
| 0.4.8 | pyasn1-modules |
|
|
|
|
|
| 0.2.7 |
|
| 0.2.7 | pybind11 |
| 2.5.0 |
|
|
|
|
|
|
|
| pybtex |
|
|
|
|
| 0.23.0 |
|
|
|
| pycairo |
|
|
|
|
| 1.20.0 |
|
|
|
| pycodestyle | 2.6.0 |
|
|
|
|
|
|
| 2.8.0 |
| pycosat | 0.6.3 |
|
|
|
|
|
|
|
|
| pycparser | 2.20 | 2.20 | 2.20 | 2.20 | 2.20 | 2.20 | 2.20 | 2.20 | 2.21 | 2.21 | pycurl | 7.43.0.5 |
|
|
|
|
|
|
|
|
| pydocstyle | 5.0.2 |
|
|
|
|
|
|
| 6.1.1 |
| pyFFTW |
|
|
|
|
| 0.12.0 |
|
|
|
| pyflakes | 2.2.0 |
|
|
|
|
|
|
| 2.4.0 |
| Pygments | 2.6.1 | 2.6.1 | 2.7.2 | 2.7.2 | 2.9.0 | 2.7.2 | 2.7.2 | 2.7.2 | 2.10.0 | 2.11.2 | pygpu |
| 0.7.6 |
|
| 0.7.6 |
| 0.7.6 |
|
|
| PyJWT |
| 1.7.1 |
|
|
|
| 1.7.1 |
|
| 2.3.0 | pylint | 2.5.3 |
|
|
|
|
|
|
| 2.12.2 |
| pyls-spyder |
|
|
|
|
|
|
|
| 0.4.0 |
| pymatgen |
|
|
|
|
| 2020.10.20 |
|
|
|
| pymc3 |
|
|
|
| 3.11.2 |
|
|
|
|
| Pympler |
|
|
|
|
| 0.9 |
|
|
|
| pyodbc | 4.0.0-unsupported |
|
|
|
|
|
|
|
|
| pyOpenSSL | 19.1.0 |
| 19.1.0 | 19.1.0 | 20.0.1 | 19.1.0 | 19.1.0 | 19.1.0 | 21.0.0 | 22.0.0 | pyparsing | 2.4.7 | 2.4.2 | 2.4.7 | 2.4.7 | 2.4.7 | 2.4.7 | 2.4.7 | 2.4.7 | 3.0.6 | 3.0.7 | pyproj |
|
|
|
| 3.1.0 |
|
|
|
|
| Pypubsub |
|
|
|
|
|
|
|
|
| 4.0.3 | PyQt5 |
| 5.13.1 | 5.12.3 | 5.12.3 | 5.12.3 | 5.12.3 | 5.12.3 | 5.12.3 | 5.12.3 | 5.12.3 | PyQt5_sip |
|
|
|
| 4.19.18 |
|
|
| 4.19.18 | 4.19.18 | PyQt5-sip |
| 4.19.21 | 4.19.18 | 4.19.18 |
| 4.19.18 | 4.19.18 | 4.19.18 |
|
| PyQtChart |
|
| 5.12 | 5.12 | 5.12 | 5.12 | 5.12 | 5.12 | 5.12 | 5.12 | PyQtWebEngine |
|
| 5.12.1 | 5.12.1 | 5.12.1 | 5.12.1 | 5.12.1 | 5.12.1 | 5.12.1 | 5.12.1 | pyrsistent | 0.16.0 | 0.15.7 | 0.17.3 | 0.17.3 | 0.17.3 | 0.17.3 | 0.17.3 | 0.17.3 | 0.18.0 | 0.18.1 | pysam |
| 0.15.2 |
|
|
|
|
|
|
|
| PySocks | 1.7.1 |
| 1.7.1 | 1.7.1 | 1.7.1 | 1.7.1 | 1.7.1 | 1.7.1 | 1.7.1 | 1.7.1 | pyspark |
| 3.0.1 |
|
|
|
| 3.2.0 |
| 3.2.0 |
| pytest | 5.4.3 |
|
|
|
|
|
|
|
|
| python-dateutil | 2.8.1 | 2.8.0 | 2.8.1 | 2.8.1 | 2.8.2 | 2.8.1 | 2.8.1 | 2.8.1 | 2.8.2 | 2.8.2 | python-jsonrpc-server | 0.3.4 |
|
|
|
|
|
|
|
|
| python-language-server | 0.34.1 |
|
|
|
|
|
|
|
|
| python-lsp-black |
|
|
|
|
|
|
|
| 1.0.1 |
| python-lsp-jsonrpc |
|
|
|
|
|
|
|
| 1.0.0 |
| python-lsp-server |
|
|
|
|
|
|
|
| 1.3.2 |
| pytz | 2020.1 | 2020.1 | 2020.4 | 2020.4 | 2021.1 | 2020.4 | 2020.4 | 2020.4 | 2021.3 | 2021.3 | pyu2f |
|
|
|
|
|
|
|
|
| 0.1.5 | PyWavelets | 1.1.1 | 1.1.1 |
|
|
|
| 1.1.1 |
|
| 1.3.0 | pyxdg | 0.26 |
|
|
|
|
|
|
| 0.27 |
| PyYAML | 5.3.1 | 5.3.1 |
| 5.4.1 |
| 5.3.1 | 5.3.1 |
| 6.0 | 6.0 | pyzmq | 19.0.1 | 18.1.0 | 20.0.0 | 20.0.0 | 22.1.0 | 20.0.0 | 20.0.0 | 20.0.0 | 22.3.0 | 22.3.0 | QDarkStyle | 2.8.1 |
|
|
|
|
|
|
| 3.0.2 |
| qstylizer |
|
|
|
|
|
|
|
| 0.2.1 |
| QtAwesome | 0.7.2 |
|
|
|
|
|
|
| 1.1.1 |
| qtconsole | 4.7.5 |
| 4.7.7 | 4.7.7 | 5.1.1 | 4.7.7 | 4.7.7 | 4.7.7 | 5.2.1 | 5.2.2 | QtPy | 1.9.0 |
| 1.9.0 | 1.9.0 | 1.9.0 | 1.9.0 | 1.9.0 | 1.9.0 | 1.11.3 | 2.0.1 | quadpy |
|
|
|
|
| 0.16.2 |
|
|
|
| regex | 2020.6.8 |
|
|
|
|
|
|
| 2021.11.10 |
| requests | 2.24.0 | 2.24.0 | 2.25.0 | 2.25.0 | 2.26.0 | 2.25.0 | 2.25.0 | 2.25.0 | 2.26.0 | 2.27.1 | requests-oauthlib |
|
|
|
|
|
| 1.3.0 |
|
| 1.3.1 | requests-unixsocket |
|
|
|
| 0.2.0 |
|
|
|
|
| retrying |
|
|
|
|
| 1.3.3 |
|
|
|
| rich |
|
|
| 9.13.0 |
|
|
|
|
|
| rope | 0.17.0 |
|
|
|
|
|
|
| 0.22.0 |
| rsa |
|
|
|
|
|
| 4.6 |
|
| 4.8 | Rtree | 0.9.4 |
|
|
|
|
|
|
| 0.9.7 |
| ruamel-yaml | 0.15.87 |
|
|
|
|
|
|
|
|
| ruamel.yaml |
|
|
|
|
| 0.16.12 |
|
|
| 0.17.21 | ruamel.yaml.clib |
|
|
|
|
| 0.2.2 |
|
|
| 0.2.6 | scikit-build |
| 0.10.0 |
|
|
|
|
|
|
|
| scikit-image | 0.16.2 |
|
|
|
|
| 0.17.2 |
|
| 0.18.1 | scikit-learn | 0.23.1 | 0.23.2 |
|
| 0.24.2 | 0.23.2 | 0.23.2 |
|
| 1.0.2 | scikit-optimize |
| 0.5.2 |
|
|
|
|
|
|
|
| scipy | 1.5.0 | 1.5.4 | 1.5.3 | 1.5.3 | 1.7.0 | 1.5.3 | 1.5.3 | 1.5.3 | 1.7.3 | 1.8.0 | seaborn | 0.10.1 | 0.9.0 | 0.11.0 | 0.11.0 | 0.11.1 | 0.11.0 | 0.11.0 | 0.11.0 | 0.11.2 | 0.11.2 | SecretStorage | 3.1.2 |
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| 3.3.1 |
| seekpath |
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| 1.9.5 |
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| semver |
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| 2.13.0 |
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|
| Send2Trash | 1.5.0 | 1.5.0 | 1.5.0 | 1.5.0 | 1.7.1 | 1.5.0 | 1.5.0 | 1.5.0 | 1.8.0 | 1.8.0 | setuptools | 49.2.0.post20200714 | 50.3.2 | 49.6.0.post20201009 | 49.6.0.post20201009 | 49.6.0.post20210108 | 49.6.0.post20201009 | 49.6.0.post20201009 | 49.6.0.post20201009 | 59.4.0 | 60.10.0 | Shapely |
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| 1.7.1 |
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| 1.8.1.post1 | simplegeneric | 0.8.1 |
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| simplejson |
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| 3.17.2 |
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| singledispatch | 3.4.0.3 |
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| sip | 4.19.13 |
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| six | 1.15.0 | 1.15.0 | 1.15.0 | 1.15.0 | 1.16.0 | 1.15.0 | 1.15.0 | 1.15.0 | 1.16.0 | 1.15.0 | smmap | 3.0.5 | 4.0.0 | 3.0.5 | 3.0.5 | 3.0.5 | 3.0.5 | 3.0.5 | 3.0.5 | 3.0.5 | 3.0.5 | sniffio |
|
| 1.2.0 | 1.2.0 | 1.2.0 | 1.2.0 | 1.2.0 | 1.2.0 | 1.2.0 | 1.2.0 | snowballstemmer | 2.0.0 |
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| 2.2.0 |
| sortedcollections | 1.2.1 |
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| sortedcontainers | 2.2.2 | 2.1.0 |
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| 2.4.0 |
| soupsieve | 2.0.1 |
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| 2.0.1 |
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| 2.3.1 | spectra |
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| 0.0.11 |
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| spglib |
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| 1.16.0 |
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| Sphinx | 3.1.2 |
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| 4.3.1 |
| sphinxcontrib-applehelp | 1.0.2 |
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| 1.0.2 |
| sphinxcontrib-devhelp | 1.0.2 |
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| 1.0.2 |
| sphinxcontrib-htmlhelp | 1.0.3 |
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| 2.0.0 |
| sphinxcontrib-jsmath | 1.0.1 |
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| 1.0.1 |
| sphinxcontrib-qthelp | 1.0.3 |
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| 1.0.3 |
| sphinxcontrib-serializinghtml | 1.1.4 |
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| 1.1.5 |
| sphinxcontrib-websupport | 1.2.3 |
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| spyder | 4.1.4 |
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| 5.2.0 |
| spyder-kernels | 1.9.2 |
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| 2.2.0 |
| SQLAlchemy | 1.3.18 |
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| stack-data |
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| 0.2.0 | statsmodels | 0.11.1 |
| 0.12.1 | 0.12.1 | 0.11.1 | 0.12.1 | 0.12.1 | 0.12.1 | 0.13.1 | 0.13.2 | stevedore |
| 1.28.0 |
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| sumo |
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| 2.1.0 |
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| sympy | 1.6.1 |
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| 1.9 | 1.7.1 |
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| tables | 3.6.1 |
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| 3.6.1 | tabulate |
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| 0.8.7 |
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| 0.8.9 | tamkin |
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| 1.2.6 |
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| tblib | 1.6.0 | 1.6.0 |
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| Tempita |
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| 0.5.3.dev0 |
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| tenacity |
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| 8.0.1 |
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| tensorboard |
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| 2.4.0 |
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| 2.8.0 | tensorboard-data-server |
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| 0.6.0 | tensorboard-plugin-wit |
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| 1.7.0 |
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| 1.8.1 | tensorflow |
| 2.4.1 |
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| 2.2.0 |
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| 2.6.0 | tensorflow-estimator |
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| 2.2.0 |
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| 2.6.0 | tensorpack |
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| 0.11 | termcolor |
| 1.1.0 |
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| 1.1.0 |
|
| 1.1.0 | terminado | 0.8.3 | 0.8.3 | 0.9.1 | 0.9.1 | 0.10.1 | 0.9.1 | 0.9.1 | 0.9.1 | 0.12.1 | 0.13.3 | testpath | 0.4.4 | 0.4.2 | 0.4.4 | 0.4.4 | 0.5.0 | 0.4.4 | 0.4.4 | 0.4.4 | 0.5.0 | 0.6.0 | textdistance |
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| 4.2.2 |
| tf-slim |
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| 1.1.0 | Theano |
| 1.0.4 |
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| 1.0.5 |
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| Theano-PyMC |
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| 1.1.2 |
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| threadpoolctl | 2.1.0 | 2.0.0 |
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| 2.2.0 | 2.1.0 | 2.1.0 |
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| 3.1.0 | three-merge |
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| 0.1.1 |
| tifffile |
| 2020.10.1 |
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| 2020.11.18 |
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| 2022.3.16 | tinycss2 |
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| 1.1.1 |
| toml | 0.10.1 |
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| 0.10.2 |
| tomli |
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| 1.2.2 |
| toolz | 0.10.0 | 0.9.0 |
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| 0.11.1 | 0.11.1 |
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| torch |
| 1.7.0 |
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| 1.4.0 |
|
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| tornado | 6.0.4 | 6.0.3 | 6.1 | 6.1 | 6.1 | 6.1 | 6.1 | 6.1 | 6.1 | 6.1 | tqdm | 4.47.0 | 4.45.0 |
|
| 4.62.0 | 4.51.0 |
|
|
| 4.63.0 | traitlets | 4.3.3 | 5.0.4 | 5.0.5 | 5.0.5 | 5.0.5 | 5.0.5 | 5.0.5 | 5.0.5 | 5.1.1 | 5.1.1 | typed-ast |
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| 1.5.1 |
| typing_extensions |
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| 4.0.1 |
| typing-extensions | 3.7.4.2 | 3.7.4 | 3.10.0.0 | 3.7.4.3 | 3.10.0.0 | 3.10.0.0 | 3.7.4.3 | 3.10.0.0 |
| 3.7.4.3 | tzlocal |
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| 2.1 |
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| ujson | 1.35 |
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| 4.2.0 |
| uncertainties |
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| 3.1.5 |
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| unicodecsv | 0.14.1 |
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| unicodedata2 |
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| 13.0.0.post2 | 14.0.0 | urllib3 | 1.25.9 | 1.25.6 | 1.25.11 | 1.25.11 | 1.26.6 | 1.25.11 | 1.25.11 | 1.25.11 | 1.26.7 | 1.26.9 | virtualenv |
| 16.7.6 |
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| virtualenv-clone |
| 0.2.6 |
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| virtualenvwrapper |
| 4.8.2 |
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| vtk |
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| 9.0.1 |
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| watchdog | 0.10.3 |
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| 2.1.6 |
| wcwidth | 0.2.5 | 0.1.7 | 0.2.5 | 0.2.5 | 0.2.5 | 0.2.5 | 0.2.5 | 0.2.5 | 0.2.5 | 0.2.5 | webencodings | 0.5.1 | 0.5.1 | 0.5.1 | 0.5.1 | 0.5.1 | 0.5.1 | 0.5.1 | 0.5.1 | 0.5.1 | 0.5.1 | websocket-client |
|
| 0.57.0 | 0.57.0 | 0.57.0 | 0.57.0 | 0.57.0 | 0.57.0 | 1.2.3 | 1.3.1 | wepy |
|
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| 1.1.0 |
|
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| Werkzeug | 1.0.1 |
|
|
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| 1.0.1 | 1.0.1 |
|
| 2.0.3 | wheel | 0.34.2 | 0.36.2 | 0.35.1 | 0.35.1 | 0.36.2 | 0.35.1 | 0.35.1 | 0.35.1 | 0.37.0 | 0.37.1 | whichcraft |
|
|
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|
| 0.6.1 |
| widgetsnbextension | 3.5.1 | 3.5.1 | 3.5.1 | 3.5.1 | 3.5.1 | 3.5.1 | 3.5.1 | 3.5.1 | 3.5.2 | 3.6.0 | wrapt | 1.11.2 | 1.12.1 |
|
|
|
| 1.12.1 |
| 1.13.3 | 1.12.1 | wurlitzer | 2.0.1 |
|
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|
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| 3.0.2 |
| wxPython |
|
|
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|
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| 4.1.1 | xarray |
|
|
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| 0.19.0 |
|
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| xlrd | 1.2.0 |
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| XlsxWriter | 1.2.9 |
|
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| xlwt | 1.3.0 |
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|
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| xmltodict | 0.12.0 |
|
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|
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| yapf | 0.30.0 |
|
|
|
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|
|
| 0.31.0 |
| yarl |
|
|
|
| 1.6.3 |
| 1.6.3 |
|
| 1.7.2 | zict | 2.0.0 | 1.0.0 |
|
|
|
|
|
|
|
| zipp | 3.1.0 |
| 3.4.0 | 3.4.0 | 3.5.0 | 3.4.0 | 3.4.0 | 3.4.0 | 3.6.0 | 3.7.0 | zope.event | 4.4 |
|
|
|
|
|
|
|
|
| zope.interface | 4.7.1 |
|
|
|
| 5.4.0 |
|
|
|
|
|
Which module should I use?
...
| Code Block |
|---|
|
conda create --name mycondaenv test123 |
OR
| Info |
|---|
Most users have a 10GB home storage quota that contains a symlink to their ceph project spaces. Most conda environments will consume or exceed your 10GB quota. You might want to install your conda environments in your ceph project spaces. These spaces have a nomenclature of <pi's username>_proj or <pi's username>_<some date in ddmmyy format>. Lets assume that my pi's username is mypiid and there exists a folder called condaenv where all conda environments will be installed | Code Block |
|---|
| conda create --prefix ${HOME}/mypiid_proj/${USER}/condaenv/mycondaenv test123 |
|
If you omit test123, then an empty environment is created.
...
| Code Block |
|---|
|
conda env list : To see list of different conda environments. Default environment has a star (*) in the second field
conda activate mycondaenv: To switch to the mycondaenv environment and use the test123 package OR
conda deactivate mycondaenv activate ${HOME}/mypiid_proj/${USER}/condaenv/mycondaenv: To switch to mycondaenv environment installed at ${HOME}/mypiid_proj/${USER}/condaenv
conda deactivate: To switch to the root environment |
...